Utility CLI

These are little utilities that are helpful for dealing with the objects in BPReveal. These take command-line flags. For example,

shapToBigwig --h5 flatScores.h5 --bw flatOutput.bw

• checkJson
  • Help Info
  • Usage
• lengthCalc
  • Help Info
  • Usage
• makeLossPlots
  • Help Info
  • Usage
• metrics
  • Help Info
  • Usage
• motifAddQuantiles
  • Help Info
  • Usage
• predictToBigwig
  • Help Info
  • Usage
• shapToBigwig
  • Help Info
  • Usage
• shapToNumpy
  • Help Info
  • Usage
• showModel
  • Help Info
  • Usage
• showTrainingProgress
  • Help Info
  • Usage