Python Module Index

b
 
b
bpreveal
    bpreveal.bedUtils
    bpreveal.callbacks
    bpreveal.checkJson
    bpreveal.colors
    bpreveal.gaOptimize
    bpreveal.generators
    bpreveal.internal.constants
    bpreveal.internal.crashQueue
    bpreveal.internal.disableTensorflowLogging
    bpreveal.internal.files
    bpreveal.internal.interpreter
    bpreveal.internal.plotUtils
    bpreveal.internal.predictUtils
    bpreveal.interpretFlat
    bpreveal.interpretPisa
    bpreveal.interpretUtils
    bpreveal.jaccard
    bpreveal.layers
    bpreveal.lengthCalc
    bpreveal.logUtils
    bpreveal.losses
    bpreveal.makeLossPlots
    bpreveal.makePisaFigure
    bpreveal.makePredictions
    bpreveal.metrics
    bpreveal.models
    bpreveal.motifAddQuantiles
    bpreveal.motifScan
    bpreveal.motifSeqletCutoffs
    bpreveal.motifUtils
    bpreveal.plotting
    bpreveal.predictToBigwig
    bpreveal.prepareBed
    bpreveal.prepareTrainingData
    bpreveal.schema
    bpreveal.shapToBigwig
    bpreveal.shapToNumpy
    bpreveal.showModel
    bpreveal.showTrainingProgress
    bpreveal.tools.addNoise
    bpreveal.tools.addNoiseUtils
    bpreveal.tools.bestMotifsOnly
    bpreveal.tools.filterProc
    bpreveal.tools.lossWeights
    bpreveal.tools.revcompTools
    bpreveal.tools.shiftBigwigs
    bpreveal.tools.shiftPisa
    bpreveal.tools.slurm
    bpreveal.tools.tileGenome
    bpreveal.trainCombinedModel
    bpreveal.training
    bpreveal.trainSoloModel
    bpreveal.trainTransformationModel
    bpreveal.ushuffle
    bpreveal.utils